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| 22.04.2013 | 15:00 | FK Ural | - | Baltika Kaliningrad | 1:0 (0:0) | |
| 15:00 | Dinamo St. Petersburg | - | Volgar Astrakhan | 1:0 (0:0) | ||
| 17:00 | Torpedo Moskva | - | FC Salyut Belgorod | 0:1 (0:0) | ||
| 17:00 | Shinnik Yaroslavl | - | FK Ufa | 1:0 (0:0) | ||
| 23.04.2013 | 10:00 | SKA-Energiya Khabarovsk | - | FK Tom Tomsk | 1:1 (1:1) | |
| 13:00 | Enisey Krasnoyarsk | - | FK Khimki | 2:1 (0:1) | ||
| 14:00 | Metallurg-Kuzbass Novokuznetsk | - | Sibir Novosibirsk | 1:0 (0:0) | ||
| 16:00 | Spartak Nalchik | - | Rotor Volgograd | 1:1 (1:0) |
| » Classement | équipe recevante | à l'extérieur | Premier tour | Second tour |
| # | Équipe | M. | G. | N. | P. | Buts | Diff. | Pts. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
FK Ural | 28 | 18 | 8 | 2 | 57:16 | 41 | 62 |
| 2 |
|
FK Tom Tomsk | 27 | 17 | 6 | 4 | 51:31 | 20 | 57 |
| 3 |
|
SKA-Energiya Khabarovsk | 28 | 12 | 11 | 5 | 31:24 | 7 | 47 |
| 4 |
|
Spartak Nalchik | 27 | 13 | 7 | 7 | 26:23 | 3 | 46 |
| 5 |
|
Baltika Kaliningrad | 27 | 11 | 7 | 9 | 28:27 | 1 | 40 |
| 6 |
|
FK Neftekhimik | 27 | 11 | 6 | 10 | 35:33 | 2 | 39 |
| 7 |
|
FK Ufa | 27 | 10 | 8 | 9 | 27:28 | -1 | 38 |
| 8 |
|
Enisey Krasnoyarsk | 28 | 9 | 10 | 9 | 28:25 | 3 | 37 |
| 9 |
|
Rotor Volgograd | 27 | 10 | 7 | 10 | 24:21 | 3 | 37 |
| 10 |
|
Sibir Novosibirsk | 27 | 10 | 7 | 10 | 30:34 | -4 | 37 |
| 11 |
|
Dinamo St. Petersburg | 27 | 10 | 3 | 14 | 27:36 | -9 | 33 |
| 12 |
|
Shinnik Yaroslavl | 28 | 7 | 10 | 11 | 25:32 | -7 | 31 |
| 13 |
|
Metallurg-Kuzbass Novokuznetsk | 28 | 8 | 5 | 15 | 16:31 | -15 | 29 |
| 14 |
|
FC Salyut Belgorod | 27 | 7 | 7 | 13 | 19:26 | -7 | 28 |
| 15 |
|
Torpedo Moskva | 27 | 5 | 12 | 10 | 26:34 | -8 | 27 |
| 16 |
|
FK Khimki | 27 | 5 | 8 | 14 | 19:31 | -12 | 23 |
| 17 |
|
Volgar Astrakhan | 27 | 3 | 10 | 14 | 16:33 | -17 | 19 |
| Promotion | |
| Relégation | |
| Relégation |
