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| 29.04.2013 | 15:00 | FK Tom Tomsk | - | Spartak Nalchik | 1:1 (0:1) | |
| 17:00 | FC Salyut Belgorod | - | Volgar Astrakhan | 2:2 (0:1) | ||
| 17:00 | Rotor Volgograd | - | Torpedo Moskva | 0:0 (0:0) | ||
| 17:00 | FK Neftekhimik | - | Dinamo St. Petersburg | 2:0 (1:0) | ||
| 30.04.2013 | 14:00 | Sibir Novosibirsk | - | SKA-Energiya Khabarovsk | 1:0 (1:0) | |
| 16:00 | FK Ufa | - | FK Ural | 0:2 (0:0) | ||
| 17:00 | FK Khimki | - | Metallurg-Kuzbass Novokuznetsk | 0:0 (0:0) | ||
| 18:00 | Baltika Kaliningrad | - | Enisey Krasnoyarsk | 3:0 (1:0) |
| » Classement | équipe recevante | à l'extérieur | Premier tour | Second tour |
| # | Équipe | M. | G. | N. | P. | Buts | Diff. | Pts. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
FK Ural | 29 | 19 | 8 | 2 | 59:16 | 43 | 65 |
| 2 |
|
FK Tom Tomsk | 28 | 17 | 7 | 4 | 52:32 | 20 | 58 |
| 3 |
|
SKA-Energiya Khabarovsk | 29 | 12 | 11 | 6 | 31:25 | 6 | 47 |
| 4 |
|
Spartak Nalchik | 28 | 13 | 8 | 7 | 27:24 | 3 | 47 |
| 5 |
|
Baltika Kaliningrad | 28 | 12 | 7 | 9 | 31:27 | 4 | 43 |
| 6 |
|
FK Neftekhimik | 28 | 12 | 6 | 10 | 37:33 | 4 | 42 |
| 7 |
|
Sibir Novosibirsk | 28 | 11 | 7 | 10 | 31:34 | -3 | 40 |
| 8 |
|
Rotor Volgograd | 28 | 10 | 8 | 10 | 24:21 | 3 | 38 |
| 9 |
|
FK Ufa | 28 | 10 | 8 | 10 | 27:30 | -3 | 38 |
| 10 |
|
Enisey Krasnoyarsk | 29 | 9 | 10 | 10 | 28:28 | 0 | 37 |
| 11 |
|
Dinamo St. Petersburg | 28 | 10 | 3 | 15 | 27:38 | -11 | 33 |
| 12 |
|
Shinnik Yaroslavl | 28 | 7 | 10 | 11 | 25:32 | -7 | 31 |
| 13 |
|
Metallurg-Kuzbass Novokuznetsk | 29 | 8 | 6 | 15 | 16:31 | -15 | 30 |
| 14 |
|
FC Salyut Belgorod | 28 | 7 | 8 | 13 | 21:28 | -7 | 29 |
| 15 |
|
Torpedo Moskva | 28 | 5 | 13 | 10 | 26:34 | -8 | 28 |
| 16 |
|
FK Khimki | 28 | 5 | 9 | 14 | 19:31 | -12 | 24 |
| 17 |
|
Volgar Astrakhan | 28 | 3 | 11 | 14 | 18:35 | -17 | 20 |
| Promotion | |
| Relégation | |
| Relégation |
