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| 13.04.2013 | 11:00 | Sibir Novosibirsk | - | Enisey Krasnoyarsk | 0:3 (0:3) | |
| 15.04.2013 | 14:00 | FK Ufa | - | FK Neftekhimik | 2:0 (0:0) | |
| 16:00 | FK Khimki | - | FK Ural | 0:0 (0:0) | ||
| 18:00 | Baltika Kaliningrad | - | Shinnik Yaroslavl | 0:0 (0:0) | ||
| 16.04.2013 | 14:00 | FK Tom Tomsk | - | Metallurg-Kuzbass Novokuznetsk | 2:0 (1:0) | |
| 16:15 | Rotor Volgograd | - | SKA-Energiya Khabarovsk | 1:2 (0:2) | ||
| 17:00 | FC Salyut Belgorod | - | Spartak Nalchik | 0:1 (0:1) | ||
| 18:45 | Volgar Astrakhan | - | Torpedo Moskva | 0:1 (0:0) |
| » Classement | équipe recevante | à l'extérieur | Premier tour | Second tour |
| # | Équipe | M. | G. | N. | P. | Buts | Diff. | Pts. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
FK Ural | 27 | 17 | 8 | 2 | 56:16 | 40 | 59 |
| 2 |
|
FK Tom Tomsk | 26 | 17 | 5 | 4 | 50:30 | 20 | 56 |
| 3 |
|
SKA-Energiya Khabarovsk | 27 | 12 | 10 | 5 | 30:23 | 7 | 46 |
| 4 |
|
Spartak Nalchik | 26 | 13 | 6 | 7 | 25:22 | 3 | 45 |
| 5 |
|
Baltika Kaliningrad | 26 | 11 | 7 | 8 | 28:26 | 2 | 40 |
| 6 |
|
FK Neftekhimik | 27 | 11 | 6 | 10 | 35:33 | 2 | 39 |
| 7 |
|
FK Ufa | 26 | 10 | 8 | 8 | 27:27 | 0 | 38 |
| 8 |
|
Sibir Novosibirsk | 26 | 10 | 7 | 9 | 30:33 | -3 | 37 |
| 9 |
|
Rotor Volgograd | 26 | 10 | 6 | 10 | 23:20 | 3 | 36 |
| 10 |
|
Enisey Krasnoyarsk | 27 | 8 | 10 | 9 | 26:24 | 2 | 34 |
| 11 |
|
Dinamo St. Petersburg | 26 | 9 | 3 | 14 | 26:36 | -10 | 30 |
| 12 |
|
Shinnik Yaroslavl | 27 | 6 | 10 | 11 | 24:32 | -8 | 28 |
| 13 |
|
Torpedo Moskva | 26 | 5 | 12 | 9 | 26:33 | -7 | 27 |
| 14 |
|
Metallurg-Kuzbass Novokuznetsk | 27 | 7 | 5 | 15 | 15:31 | -16 | 26 |
| 15 |
|
FC Salyut Belgorod | 26 | 6 | 7 | 13 | 18:26 | -8 | 25 |
| 16 |
|
FK Khimki | 26 | 5 | 8 | 13 | 18:29 | -11 | 23 |
| 17 |
|
Volgar Astrakhan | 26 | 3 | 10 | 13 | 16:32 | -16 | 19 |
| Promotion | |
| Relégation | |
| Relégation |
