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| 08.04.2013 | 13:00 | Enisey Krasnoyarsk | - | FK Tom Tomsk | 1:1 (0:1) | |
| 13:00 | Dinamo St. Petersburg | - | Torpedo Moskva | 1:0 (1:0) | ||
| 14:00 | FK Neftekhimik | - | Baltika Kaliningrad | 1:0 (0:0) | ||
| 15:00 | FK Ural | - | Sibir Novosibirsk | 5:2 (3:0) | ||
| 17:00 | Shinnik Yaroslavl | - | FK Khimki | 0:1 (0:0) | ||
| 09.04.2013 | 10:00 | SKA-Energiya Khabarovsk | - | FC Salyut Belgorod | 0:3 (0:0) | |
| 14:00 | Metallurg-Kuzbass Novokuznetsk | - | Rotor Volgograd | 2:1 (0:0) | ||
| 16:00 | Spartak Nalchik | - | Volgar Astrakhan | 3:1 (0:0) |
| » Classement | équipe recevante | à l'extérieur | Premier tour | Second tour |
| # | Équipe | M. | G. | N. | P. | Buts | Diff. | Pts. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
FK Ural | 26 | 17 | 7 | 2 | 56:16 | 40 | 58 |
| 2 |
|
FK Tom Tomsk | 25 | 16 | 5 | 4 | 48:30 | 18 | 53 |
| 3 |
|
SKA-Energiya Khabarovsk | 26 | 11 | 10 | 5 | 28:22 | 6 | 43 |
| 4 |
|
Spartak Nalchik | 25 | 12 | 6 | 7 | 24:22 | 2 | 42 |
| 5 |
|
FK Neftekhimik | 26 | 11 | 6 | 9 | 35:31 | 4 | 39 |
| 6 |
|
Baltika Kaliningrad | 25 | 11 | 6 | 8 | 28:26 | 2 | 39 |
| 7 |
|
Sibir Novosibirsk | 25 | 10 | 7 | 8 | 30:30 | 0 | 37 |
| 8 |
|
Rotor Volgograd | 25 | 10 | 6 | 9 | 22:18 | 4 | 36 |
| 9 |
|
FK Ufa | 25 | 9 | 8 | 8 | 25:27 | -2 | 35 |
| 10 |
|
Enisey Krasnoyarsk | 26 | 7 | 10 | 9 | 23:24 | -1 | 31 |
| 11 |
|
Dinamo St. Petersburg | 26 | 9 | 3 | 14 | 26:36 | -10 | 30 |
| 12 |
|
Shinnik Yaroslavl | 26 | 6 | 9 | 11 | 24:32 | -8 | 27 |
| 13 |
|
Metallurg-Kuzbass Novokuznetsk | 26 | 7 | 5 | 14 | 15:29 | -14 | 26 |
| 14 |
|
FC Salyut Belgorod | 25 | 6 | 7 | 12 | 18:25 | -7 | 25 |
| 15 |
|
Torpedo Moskva | 25 | 4 | 12 | 9 | 25:33 | -8 | 24 |
| 16 |
|
FK Khimki | 25 | 5 | 7 | 13 | 18:29 | -11 | 22 |
| 17 |
|
Volgar Astrakhan | 25 | 3 | 10 | 12 | 16:31 | -15 | 19 |
| Promotion | |
| Relégation | |
| Relégation |
