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| Classement | Premier tour | » Second tour |
| # | Équipe | M. | G. | N. | P. | Buts | Diff. | Pts. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Ehime FC | 19 | 10 | 5 | 4 | 31:25 | 6 | 35 |
| 2 |
|
Gainare Tottori | 19 | 9 | 5 | 5 | 31:25 | 6 | 32 |
| 3 |
|
Kagoshima United | 19 | 9 | 4 | 6 | 31:21 | 10 | 31 |
| 4 |
|
FC Imabari | 19 | 9 | 3 | 7 | 27:21 | 6 | 30 |
| 5 |
|
Nara Club | 19 | 8 | 6 | 5 | 19:15 | 4 | 30 |
| 6 |
|
Yokohama S&CC | 19 | 9 | 3 | 7 | 23:20 | 3 | 30 |
| 7 |
|
Vanraure Hachinohe | 19 | 8 | 6 | 5 | 27:26 | 1 | 30 |
| 8 |
|
Iwate Grulla Morioka | 19 | 8 | 5 | 6 | 26:29 | -3 | 29 |
| 9 |
|
Fukushima United | 19 | 7 | 7 | 5 | 23:18 | 5 | 28 |
| 10 |
|
FC Gifu | 19 | 7 | 6 | 6 | 23:18 | 5 | 27 |
| 11 |
|
SC Sagamihara | 19 | 7 | 6 | 6 | 25:21 | 4 | 27 |
| 12 |
|
AC Nagano Parceiro | 19 | 7 | 6 | 6 | 26:30 | -4 | 27 |
| 13 |
|
Kataller Toyama | 19 | 8 | 2 | 9 | 27:26 | 1 | 26 |
| 14 |
|
Matsumoto Yamaga | 19 | 7 | 5 | 7 | 18:21 | -3 | 26 |
| 15 |
|
FC Osaka | 19 | 6 | 7 | 6 | 25:24 | 1 | 25 |
| 16 |
|
Kamatamare Sanuki | 19 | 5 | 6 | 8 | 16:19 | -3 | 21 |
| 17 |
|
Azul Claro Numazu | 19 | 7 | 0 | 12 | 25:29 | -4 | 21 |
| 18 |
|
FC Ryūkyū | 19 | 5 | 4 | 10 | 21:33 | -12 | 19 |
| 19 |
|
Giravanz Kitakyushu | 19 | 4 | 3 | 12 | 16:21 | -5 | 15 |
| 20 |
|
Tegevajaro Miyazaki | 19 | 3 | 5 | 11 | 14:32 | -18 | 14 |
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